STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrp2Two-component system response regulator. (234 aa)    
Predicted Functional Partners:
hpk2
Two-component system histidine protein kinase; sensor protein.
 
 0.979
hpk3
Two-component system histidine kinase, sensor protein, phosphate transport regulon.
 
 0.847
hpk5
Two-component system histidine protein kinase; sensor protein.
 
 0.834
hpk7
Two-component system histidine protein kinase; sensor protein.
 
 0.830
hpk11
Two component system histidine protein kinase; sensor protein.
 
 0.800
hpk1
Two-component system histidine protein kinase; sensor protein.
 
 0.650
lamC
Two-component system histidine protein kinase; sensor protein.
  
 
 0.594
cggR
Central glycolytic genes regulator.
      
 0.547
lp_0284
Hypothetical protein.
  
    0.543
pts10A
PTS system, mannose-specific EIIAcomponent.
      
 0.503
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.