STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potASpermidine/putrescine ABC transporter,ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (365 aa)    
Predicted Functional Partners:
potD
Spermidine/putrescine ABC transporter,substrate binding protein.
 
 0.999
potC
Spermidine/putrescine ABC transporter, permease protein.
 
 
 0.999
potB
Spermidine/putrescine ABC transporter, permease protein.
 0.999
lp_3040
Multidrug ABC transporter, ATP-binding and permease protein.
 
 
   
0.901
lp_2893
ABC transporter, ATP-binding and permease protein.
 
 
   
0.900
lp_2395
ABC transporter, ATP-binding and permease protein.
 
 
   
0.887
lp_2497
Efflux ABC transporter, ATP-binding and permease protein.
 
 
   
0.867
lp_0319
Transcription regulator, spermidine/putrescine transport operon.
    0.844
lp_1748
Iron ABC transporter, permease protein.
  
 0.716
plnG
Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG.
 
 
   
0.707
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.