STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdHAcetaldehyde dehydrogenase. (455 aa)    
Predicted Functional Partners:
dhaT
1,3-propanediol dehydrogenase.
 
 0.982
fum
Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 
 0.611
lp_0163
acyl-CoA dehydrogenase domain protein.
  
 
 0.575
pflB
Formate C-acetyltransferase.
 
  
 0.558
calB
Coniferyl aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
      
 0.541
pflF
Formate C-acetyltransferase.
  
  
 0.534
pox5
Pyruvate oxidase; Important for the aerobic growth. Decarboxylates pyruvate in four steps. The energy released is partially stored in acetyl phosphate.
  
 
 0.526
pox3
Pyruvate oxidase; Belongs to the TPP enzyme family.
  
 
 0.508
lp_0931
Fumarylacetoacetate hydrolase family protein.
  
 
 0.506
lp_3030
Phosphatidyl-ethanolamine binding protein (PEBP).
   
  
 0.496
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.