STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylP1Carbohydrate (isoprimoverose like)/proton symporter, GPH family. (438 aa)    
Predicted Functional Partners:
lp_2820
Hypothetical membrane protein, DUF1440 family.
 
    0.628
lp_0320
Hypothetical protein.
   
    0.586
lp_0558
Di-and tricarboxylate transporter.
  
  
 0.503
pox3
Pyruvate oxidase; Belongs to the TPP enzyme family.
   
    0.487
lp_0332
Hypothetical membrane protein.
  
    0.478
lp_0889
Transcription regulator, MarR family.
   
    0.476
kat
Catalase; Belongs to the catalase family.
   
    0.470
lp_0333
Hypothetical protein.
  
    0.466
mrsB
protein-methionine-S-oxide reductase.
  
    0.457
xylR
Xylose operon regulator, ROK family.
  
  
 0.449
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.