STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0355Multicopper oxidase. (501 aa)    
Predicted Functional Partners:
copB
Copper transporting ATPase.
 
  
 0.608
lp_3442
Heavy metal binding protein.
 
 
 0.567
gapB
Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.531
copR
Transcription regulator of CopAB ATPases.
     
 0.515
rpiA2
Ribose 5-phosphate epimerase.
  
    0.513
hpk7
Two-component system histidine protein kinase; sensor protein.
  
 
 0.493
lamC
Two-component system histidine protein kinase; sensor protein.
  
 
 0.492
znuB
Zinc/iron ABC transporter, permease protein.
      
 0.489
hpk2
Two-component system histidine protein kinase; sensor protein.
  
 
 0.478
moaA
Molybdopterin precursor synthase MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
  
 0.475
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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