STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
napA1Na(+)/H(+) antiporter. (394 aa)    
Predicted Functional Partners:
plnW
Hypothetical membrane protein PlnW,membrane-bound protease CAAX family.
   
  
 0.672
valT
Branched-chain (main: valine) amino acid transporter, LIVCS family; Component of the transport system for branched-chain amino acids.
  
    0.651
plnT
Hypothetical membrane protein PlnT,membrane-bound protease CAAX family.
   
  
 0.590
plnO
Plantaricin biosynthesis protein PlnO.
     
 0.506
plnL
Bacteriocin immunity protein PlnL.
   
  
 0.487
plnP
Bacteriocin immunity protein PlnP,membrane-bound protease CAAX family.
   
  
 0.486
plnS
Plantaricin biosynthesis protein PlnS.
      
 0.433
lp_3150
Malate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
   
  
 0.433
plnM
Bacteriocin immunity protein PlnM.
      
 0.431
lp_3549
Transcription regulator, DeoR family.
      
 0.431
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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