Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| plnA | plnC | lp_0415 | lp_0417 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Two-component response regulator PlnC,activator. | 0.913 |
| plnA | plnJ | lp_0415 | lp_0406 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnJ. | 0.860 |
| plnA | plnK | lp_0415 | lp_0405 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnK. | 0.746 |
| plnA | plnL | lp_0415 | lp_0404 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnL. | 0.737 |
| plnA | plnN | lp_0415 | lp_0410 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnN. | 0.796 |
| plnA | plnO | lp_0415 | lp_0411 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnO. | 0.662 |
| plnA | plnR | lp_0415 | lp_0403 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnR. | 0.578 |
| plnA | plnS | lp_0415 | lp_0424a | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnS. | 0.616 |
| plnA | plnT | lp_0415 | lp_0425 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Hypothetical membrane protein PlnT,membrane-bound protease CAAX family. | 0.646 |
| plnA | plnW | lp_0415 | lp_0429 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Hypothetical membrane protein PlnW,membrane-bound protease CAAX family. | 0.727 |
| plnC | plnA | lp_0417 | lp_0415 | Two-component response regulator PlnC,activator. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.913 |
| plnC | plnJ | lp_0417 | lp_0406 | Two-component response regulator PlnC,activator. | Bacteriocin precursor peptide PlnJ. | 0.716 |
| plnC | plnK | lp_0417 | lp_0405 | Two-component response regulator PlnC,activator. | Bacteriocin precursor peptide PlnK. | 0.738 |
| plnC | plnL | lp_0417 | lp_0404 | Two-component response regulator PlnC,activator. | Bacteriocin immunity protein PlnL. | 0.703 |
| plnC | plnN | lp_0417 | lp_0410 | Two-component response regulator PlnC,activator. | Bacteriocin precursor peptide PlnN. | 0.832 |
| plnC | plnO | lp_0417 | lp_0411 | Two-component response regulator PlnC,activator. | Plantaricin biosynthesis protein PlnO. | 0.662 |
| plnC | plnR | lp_0417 | lp_0403 | Two-component response regulator PlnC,activator. | Plantaricin biosynthesis protein PlnR. | 0.638 |
| plnC | plnS | lp_0417 | lp_0424a | Two-component response regulator PlnC,activator. | Plantaricin biosynthesis protein PlnS. | 0.556 |
| plnC | plnW | lp_0417 | lp_0429 | Two-component response regulator PlnC,activator. | Hypothetical membrane protein PlnW,membrane-bound protease CAAX family. | 0.580 |
| plnJ | plnA | lp_0406 | lp_0415 | Bacteriocin precursor peptide PlnJ. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.860 |
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