Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| plnA | plnE | lp_0415 | lp_0422 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnE. | 0.913 |
| plnA | plnF | lp_0415 | lp_0421 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnF. | 0.909 |
| plnA | plnG | lp_0415 | lp_0423 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG. | 0.758 |
| plnA | plnH | lp_0415 | lp_0424 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin ABC transporter, accessory factor PlnH. | 0.701 |
| plnA | plnI | lp_0415 | lp_0419 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnI,membrane-bound protease CAAX family. | 0.760 |
| plnA | plnJ | lp_0415 | lp_0406 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnJ. | 0.860 |
| plnA | plnK | lp_0415 | lp_0405 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnK. | 0.746 |
| plnA | plnL | lp_0415 | lp_0404 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnL. | 0.737 |
| plnA | plnN | lp_0415 | lp_0410 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnN. | 0.796 |
| plnA | plnR | lp_0415 | lp_0403 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnR. | 0.578 |
| plnE | plnA | lp_0422 | lp_0415 | Bacteriocin precursor peptide PlnE. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.913 |
| plnE | plnF | lp_0422 | lp_0421 | Bacteriocin precursor peptide PlnE. | Bacteriocin precursor peptide PlnF. | 0.995 |
| plnE | plnG | lp_0422 | lp_0423 | Bacteriocin precursor peptide PlnE. | Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG. | 0.881 |
| plnE | plnH | lp_0422 | lp_0424 | Bacteriocin precursor peptide PlnE. | Bacteriocin ABC transporter, accessory factor PlnH. | 0.850 |
| plnE | plnI | lp_0422 | lp_0419 | Bacteriocin precursor peptide PlnE. | Bacteriocin immunity protein PlnI,membrane-bound protease CAAX family. | 0.951 |
| plnE | plnJ | lp_0422 | lp_0406 | Bacteriocin precursor peptide PlnE. | Bacteriocin precursor peptide PlnJ. | 0.868 |
| plnE | plnK | lp_0422 | lp_0405 | Bacteriocin precursor peptide PlnE. | Bacteriocin precursor peptide PlnK. | 0.746 |
| plnE | plnL | lp_0422 | lp_0404 | Bacteriocin precursor peptide PlnE. | Bacteriocin immunity protein PlnL. | 0.848 |
| plnE | plnN | lp_0422 | lp_0410 | Bacteriocin precursor peptide PlnE. | Bacteriocin precursor peptide PlnN. | 0.722 |
| plnF | plnA | lp_0421 | lp_0415 | Bacteriocin precursor peptide PlnF. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.909 |
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