STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plnPBacteriocin immunity protein PlnP,membrane-bound protease CAAX family. (248 aa)    
Predicted Functional Partners:
plnO
Plantaricin biosynthesis protein PlnO.
  
  
 0.966
plnM
Bacteriocin immunity protein PlnM.
  
  
 0.960
plnN
Bacteriocin precursor peptide PlnN.
  
  
 0.934
plnB
Two-componet system histidine protein kinase PlnB; sensor protein.
 
  
 0.918
plnC
Two-component response regulator PlnC,activator.
 
  
 0.859
plnD
Two-component response regulator PlnD,repressor.
 
  
 0.847
plnH
Bacteriocin ABC transporter, accessory factor PlnH.
  
  
 0.767
plnL
Bacteriocin immunity protein PlnL.
   
  
 0.746
plnV
Hypothetical membrane protein plnV,membrane-bound protease CAAX family.
   
  
 0.721
lp_0301
Membrane-bound protease, CAAX family.
  
     0.702
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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