Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| plnA | plnB | lp_0415 | lp_0416 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Two-componet system histidine protein kinase PlnB; sensor protein. | 0.983 |
| plnA | plnC | lp_0415 | lp_0417 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Two-component response regulator PlnC,activator. | 0.913 |
| plnA | plnJ | lp_0415 | lp_0406 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnJ. | 0.860 |
| plnA | plnM | lp_0415 | lp_0409 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnM. | 0.712 |
| plnA | plnN | lp_0415 | lp_0410 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnN. | 0.796 |
| plnA | plnO | lp_0415 | lp_0411 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnO. | 0.662 |
| plnA | plnP | lp_0415 | lp_0412 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnP,membrane-bound protease CAAX family. | 0.669 |
| plnA | plnQ | lp_0415 | lp_0413 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnQ. | 0.724 |
| plnA | plnU | lp_0415 | lp_0426 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Hypothetical membrane protein PlnU,membrane-bound protease CAAX family. | 0.499 |
| plnA | plnV | lp_0415 | lp_0428 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Hypothetical membrane protein plnV,membrane-bound protease CAAX family. | 0.557 |
| plnB | plnA | lp_0416 | lp_0415 | Two-componet system histidine protein kinase PlnB; sensor protein. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.983 |
| plnB | plnC | lp_0416 | lp_0417 | Two-componet system histidine protein kinase PlnB; sensor protein. | Two-component response regulator PlnC,activator. | 0.998 |
| plnB | plnJ | lp_0416 | lp_0406 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin precursor peptide PlnJ. | 0.742 |
| plnB | plnM | lp_0416 | lp_0409 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin immunity protein PlnM. | 0.833 |
| plnB | plnN | lp_0416 | lp_0410 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin precursor peptide PlnN. | 0.771 |
| plnB | plnO | lp_0416 | lp_0411 | Two-componet system histidine protein kinase PlnB; sensor protein. | Plantaricin biosynthesis protein PlnO. | 0.850 |
| plnB | plnP | lp_0416 | lp_0412 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin immunity protein PlnP,membrane-bound protease CAAX family. | 0.918 |
| plnB | plnQ | lp_0416 | lp_0413 | Two-componet system histidine protein kinase PlnB; sensor protein. | Plantaricin biosynthesis protein PlnQ. | 0.621 |
| plnB | plnU | lp_0416 | lp_0426 | Two-componet system histidine protein kinase PlnB; sensor protein. | Hypothetical membrane protein PlnU,membrane-bound protease CAAX family. | 0.596 |
| plnB | plnV | lp_0416 | lp_0428 | Two-componet system histidine protein kinase PlnB; sensor protein. | Hypothetical membrane protein plnV,membrane-bound protease CAAX family. | 0.564 |
page 1 of 6