Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| plnA | plnB | lp_0415 | lp_0416 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Two-componet system histidine protein kinase PlnB; sensor protein. | 0.983 |
| plnA | plnE | lp_0415 | lp_0422 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnE. | 0.913 |
| plnA | plnF | lp_0415 | lp_0421 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnF. | 0.909 |
| plnA | plnG | lp_0415 | lp_0423 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG. | 0.758 |
| plnA | plnH | lp_0415 | lp_0424 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin ABC transporter, accessory factor PlnH. | 0.701 |
| plnA | plnI | lp_0415 | lp_0419 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnI,membrane-bound protease CAAX family. | 0.760 |
| plnA | plnJ | lp_0415 | lp_0406 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin precursor peptide PlnJ. | 0.860 |
| plnA | plnL | lp_0415 | lp_0404 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Bacteriocin immunity protein PlnL. | 0.737 |
| plnA | plnS | lp_0415 | lp_0424a | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Plantaricin biosynthesis protein PlnS. | 0.616 |
| plnA | plnT | lp_0415 | lp_0425 | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | Hypothetical membrane protein PlnT,membrane-bound protease CAAX family. | 0.646 |
| plnB | plnA | lp_0416 | lp_0415 | Two-componet system histidine protein kinase PlnB; sensor protein. | Plantaricin A precursor peptide, induction factor; This heat stable bacteriocin inhibits the growth of closely related Lactobacillus species. It may act as a pore-forming protein, creating a channel in the cell membrane through a 'barrel stave' mechanism. | 0.983 |
| plnB | plnE | lp_0416 | lp_0422 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin precursor peptide PlnE. | 0.914 |
| plnB | plnF | lp_0416 | lp_0421 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin precursor peptide PlnF. | 0.908 |
| plnB | plnG | lp_0416 | lp_0423 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin ABC-transporter, ATP-binding and permease protein PlnG. | 0.828 |
| plnB | plnH | lp_0416 | lp_0424 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin ABC transporter, accessory factor PlnH. | 0.699 |
| plnB | plnI | lp_0416 | lp_0419 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin immunity protein PlnI,membrane-bound protease CAAX family. | 0.838 |
| plnB | plnJ | lp_0416 | lp_0406 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin precursor peptide PlnJ. | 0.742 |
| plnB | plnL | lp_0416 | lp_0404 | Two-componet system histidine protein kinase PlnB; sensor protein. | Bacteriocin immunity protein PlnL. | 0.799 |
| plnB | plnS | lp_0416 | lp_0424a | Two-componet system histidine protein kinase PlnB; sensor protein. | Plantaricin biosynthesis protein PlnS. | 0.530 |
| plnB | plnT | lp_0416 | lp_0425 | Two-componet system histidine protein kinase PlnB; sensor protein. | Hypothetical membrane protein PlnT,membrane-bound protease CAAX family. | 0.573 |
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