STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuBZinc/iron ABC transporter, permease protein. (267 aa)    
Predicted Functional Partners:
znuC
Zinc/iron ABC transporter, ATP-binding protein.
 0.999
mtsC
Manganese ABC transporter, ATP-binding protein.
 
 
 0.959
lp_3018
ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.919
lp_3302
Metal ion ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.918
mtsA
Manganese/zinc ABC transporter, substrate binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.894
mntH3
Manganese transport protein.
   
  
 0.619
lp_0868
Metal uptake regulator; Belongs to the Fur family.
 
  
 0.583
mtsB
Manganese ABC transporter, permease protein.
 
 
 
0.565
copR
Transcription regulator of CopAB ATPases.
  
  
 0.560
purR
Purine biosynthesis operon repressor,phosphoribosyltransferase.
  
  
 0.547
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.