Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| comFA | lp_0476 | lp_0735 | lp_0476 | Late competence protein, ATP-dependent DNA helicase/translocase. | Metal-dependent phosphohydrolase, HD family. | 0.488 |
| comFA | lp_2273 | lp_0735 | lp_2273 | Late competence protein, ATP-dependent DNA helicase/translocase. | Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family. | 0.479 |
| comFA | rpoE | lp_0735 | lp_0480 | Late competence protein, ATP-dependent DNA helicase/translocase. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.719 |
| lp_0432 | lp_0910 | lp_0432 | lp_0910 | DNA helicase. | DNA helicase. | 0.506 |
| lp_0432 | lp_2157 | lp_0432 | lp_2157 | DNA helicase. | Hypothetical protein; Belongs to the UPF0356 family. | 0.457 |
| lp_0432 | rpoC | lp_0432 | lp_1022 | DNA helicase. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.726 |
| lp_0432 | rpoE | lp_0432 | lp_0480 | DNA helicase. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.701 |
| lp_0432 | rpoZ | lp_0432 | lp_1613 | DNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.666 |
| lp_0476 | comFA | lp_0476 | lp_0735 | Metal-dependent phosphohydrolase, HD family. | Late competence protein, ATP-dependent DNA helicase/translocase. | 0.488 |
| lp_0476 | lp_0479 | lp_0476 | lp_0479 | Metal-dependent phosphohydrolase, HD family. | Hypothetical protein, DUF1934 family. | 0.610 |
| lp_0476 | lp_2273 | lp_0476 | lp_2273 | Metal-dependent phosphohydrolase, HD family. | Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family. | 0.451 |
| lp_0476 | rpoE | lp_0476 | lp_0480 | Metal-dependent phosphohydrolase, HD family. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.836 |
| lp_0479 | lp_0476 | lp_0479 | lp_0476 | Hypothetical protein, DUF1934 family. | Metal-dependent phosphohydrolase, HD family. | 0.610 |
| lp_0479 | rpoE | lp_0479 | lp_0480 | Hypothetical protein, DUF1934 family. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.785 |
| lp_0910 | lp_0432 | lp_0910 | lp_0432 | DNA helicase. | DNA helicase. | 0.506 |
| lp_0910 | lp_2157 | lp_0910 | lp_2157 | DNA helicase. | Hypothetical protein; Belongs to the UPF0356 family. | 0.455 |
| lp_0910 | rpoC | lp_0910 | lp_1022 | DNA helicase. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.725 |
| lp_0910 | rpoE | lp_0910 | lp_0480 | DNA helicase. | DNA-directed RNA polymerase, delta subunit; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family. | 0.738 |
| lp_0910 | rpoZ | lp_0910 | lp_1613 | DNA helicase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.663 |
| lp_2157 | lp_0432 | lp_2157 | lp_0432 | Hypothetical protein; Belongs to the UPF0356 family. | DNA helicase. | 0.457 |
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