Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
larA | ldhD | lp_0104 | lp_2057 | Lactate racemization operon protein LarA; Catalyzes the interconversion between the D- and L-isomers of lactate. May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient. D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance. | D-lactate dehydrogenase. | 0.953 |
larA | ldhL1 | lp_0104 | lp_0537 | Lactate racemization operon protein LarA; Catalyzes the interconversion between the D- and L-isomers of lactate. May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient. D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.951 |
larA | mleS | lp_0104 | lp_1118 | Lactate racemization operon protein LarA; Catalyzes the interconversion between the D- and L-isomers of lactate. May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient. D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance. | Malolactic enzyme; Involved in the malolactic fermentation (MLF) of wine, which results in a natural decrease in acidity and favorable changes in wine flavors. Catalyzes the decarboxylation of L-malate to L-lactate. Belongs to the malic enzymes family. | 0.906 |
ldhD | larA | lp_2057 | lp_0104 | D-lactate dehydrogenase. | Lactate racemization operon protein LarA; Catalyzes the interconversion between the D- and L-isomers of lactate. May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient. D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance. | 0.953 |
ldhD | ldhL1 | lp_2057 | lp_0537 | D-lactate dehydrogenase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.990 |
ldhD | mae | lp_2057 | lp_1105 | D-lactate dehydrogenase. | Malic enzyme, NAD-dependent. | 0.910 |
ldhD | pdhB | lp_2057 | lp_2153 | D-lactate dehydrogenase. | Pyruvate dehydrogenase complex, E1 component,beta subunit. | 0.910 |
ldhD | pflB | lp_2057 | lp_3313 | D-lactate dehydrogenase. | Formate C-acetyltransferase. | 0.914 |
ldhD | pflF | lp_2057 | lp_2598 | D-lactate dehydrogenase. | Formate C-acetyltransferase. | 0.914 |
ldhD | pgi | lp_2057 | lp_2502 | D-lactate dehydrogenase. | Glucose-6-phosphate isomerase. | 0.618 |
ldhD | pycA | lp_2057 | lp_2136 | D-lactate dehydrogenase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.908 |
ldhD | pyk | lp_2057 | lp_1897 | D-lactate dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.984 |
ldhL1 | larA | lp_0537 | lp_0104 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Lactate racemization operon protein LarA; Catalyzes the interconversion between the D- and L-isomers of lactate. May act as a rescue enzyme to ensure D-lactate production in physiological conditions where its production by the D-lactate dehydrogenase LdhD is not sufficient. D-Lactate is absolutely required for growth of L.plantarum and is an essential component of the cell wall peptidoglycan in this species, where it is incorporated as the last residue of the muramoyl-pentadepsipeptide peptidoglycan precursor; its incorporation confers high level of vancomycin resistance. | 0.951 |
ldhL1 | ldhD | lp_0537 | lp_2057 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | D-lactate dehydrogenase. | 0.990 |
ldhL1 | mae | lp_0537 | lp_1105 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Malic enzyme, NAD-dependent. | 0.930 |
ldhL1 | mleS | lp_0537 | lp_1118 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Malolactic enzyme; Involved in the malolactic fermentation (MLF) of wine, which results in a natural decrease in acidity and favorable changes in wine flavors. Catalyzes the decarboxylation of L-malate to L-lactate. Belongs to the malic enzymes family. | 0.957 |
ldhL1 | pdhB | lp_0537 | lp_2153 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Pyruvate dehydrogenase complex, E1 component,beta subunit. | 0.925 |
ldhL1 | pflB | lp_0537 | lp_3313 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Formate C-acetyltransferase. | 0.926 |
ldhL1 | pflF | lp_0537 | lp_2598 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Formate C-acetyltransferase. | 0.927 |
ldhL1 | pgi | lp_0537 | lp_2502 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Glucose-6-phosphate isomerase. | 0.958 |
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