Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| hsp33 | lp_0541 | lp_0548 | lp_0541 | Heat shock protein HSP33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | Ribosome-associated heat shock protein. | 0.929 |
| lp_0540 | lp_0541 | lp_0540 | lp_0541 | Polysaccharide transporter. | Ribosome-associated heat shock protein. | 0.954 |
| lp_0541 | hsp33 | lp_0541 | lp_0548 | Ribosome-associated heat shock protein. | Heat shock protein HSP33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | 0.929 |
| lp_0541 | lp_0540 | lp_0541 | lp_0540 | Ribosome-associated heat shock protein. | Polysaccharide transporter. | 0.954 |
| lp_0541 | lp_1793 | lp_0541 | lp_1793 | Ribosome-associated heat shock protein. | Fibrinogen-binding family protein. | 0.855 |
| lp_0541 | rplB | lp_0541 | lp_1036 | Ribosome-associated heat shock protein. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.774 |
| lp_0541 | rplQ | lp_0541 | lp_1063 | Ribosome-associated heat shock protein. | 50S ribosomal protein L17. | 0.806 |
| lp_0541 | rplS | lp_0541 | lp_1640 | Ribosome-associated heat shock protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.860 |
| lp_0541 | rplT | lp_0541 | lp_1517 | Ribosome-associated heat shock protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.777 |
| lp_0541 | rpmB | lp_0541 | lp_1624 | Ribosome-associated heat shock protein. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.795 |
| lp_0541 | rpmC | lp_0541 | lp_1043 | Ribosome-associated heat shock protein. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.776 |
| lp_0541 | rpmH | lp_0541 | lp_3688a | Ribosome-associated heat shock protein. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.786 |
| lp_1793 | lp_0541 | lp_1793 | lp_0541 | Fibrinogen-binding family protein. | Ribosome-associated heat shock protein. | 0.855 |
| lp_1793 | rplB | lp_1793 | lp_1036 | Fibrinogen-binding family protein. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.671 |
| lp_1793 | rplQ | lp_1793 | lp_1063 | Fibrinogen-binding family protein. | 50S ribosomal protein L17. | 0.542 |
| lp_1793 | rplS | lp_1793 | lp_1640 | Fibrinogen-binding family protein. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.601 |
| lp_1793 | rplT | lp_1793 | lp_1517 | Fibrinogen-binding family protein. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.565 |
| lp_1793 | rpmB | lp_1793 | lp_1624 | Fibrinogen-binding family protein. | 50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.548 |
| lp_1793 | rpmC | lp_1793 | lp_1043 | Fibrinogen-binding family protein. | 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.654 |
| lp_1793 | rpmH | lp_1793 | lp_3688a | Fibrinogen-binding family protein. | 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.570 |
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