STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0557Serine/threonine protein phosphatase. (280 aa)    
Predicted Functional Partners:
lp_0381
Ankyrin repeat family protein.
   
 0.991
lp_0297
Extracellular protein, CscC family.
  
 
 0.858
repA
Replication protein.
   
 0.808
lp_0556
Hypothetical protein.
  
    0.678
dnaK
Chaperone, heat shock protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 
 0.633
groEL
GroEL chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.594
lp_0555
Hypothetical protein.
  
    0.585
pepI
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates.
  
 0.583
lp_0122
Alpha-beta hydrolase superfamily.
  
 0.583
pepR1
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
 0.583
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.