STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0568Hypothetical protein. (144 aa)    
Predicted Functional Partners:
lp_2393
Lipoprotein precursor.
  
    0.735
lp_3448
Acetyltransferase, GNAT family.
 
     0.692
pacL2
Cation transporting P-type ATPase.
  
    0.685
lp_1241
Hypothetical protein, DUF402 family; Belongs to the UPF0374 family.
  
    0.645
lp_2669
Hypothetical protein.
  
    0.611
lp_0126
Stress-responsive transcription regulator.
  
    0.573
lp_0570
Metallopeptidase, SprT family; Belongs to the SprT family.
  
    0.572
tex
Transcription accessory protein, contains S1 RNA binding domain.
       0.535
lp_2893
ABC transporter, ATP-binding and permease protein.
  
    0.491
lp_2160
Hypothetical protein.
  
    0.481
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.