STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0625Prophage P1 protein 2, mitogenic factor, cell surface lipoprotein. (387 aa)    
Predicted Functional Partners:
lp_0984
Hypothetical protein.
  
     0.656
lp_3014
Extracellular transglycosylase, with LysM peptidoglycan binding domain.
  
     0.654
lp_3015
Extracellular transglycosylase, with LysM peptidoglycan binding domain.
  
     0.646
lp_3077
Extracellular protein.
  
    0.618
ftsK1
FtsK/SpoIIIE family protein; Belongs to the FtsK/SpoIIIE/SftA family.
  
  
 0.565
tauE2
Sulfite export protein.
  
     0.561
lp_2451
Prophage P2a protein 6; endonuclease.
   
    0.553
lp_0628
Prophage P1 protein 5, superinfection exclusion (cell surface N-anchored).
   
    0.541
lp_3322
Hypothetical protein.
  
    0.512
lp_2810
Glycosyl hydrolase, family 25.
 
    0.510
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.