STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0653Prophage P1 protein 30. (115 aa)    
Predicted Functional Partners:
lp_0647
Prophage P1 protein 24, holliday junction resolvase.
  
    0.903
lp_0654
Prophage P1 protein 31.
  
    0.886
lp_0648
Prophage P1 protein 25.
  
    0.865
lp_0652
Prophage P1 protein 29.
  
    0.794
lp_0643
Prophage P1 protein 20.
  
  
 0.787
lp_0655
Prophage P1 protein 32.
  
    0.785
lp_0646
Prophage P1 protein 23.
  
    0.782
lp_0649
Prophage P1 protein 26.
  
    0.771
lp_0650
Prophage P1 protein 27.
  
    0.771
lp_0640
Prophage P1 protein 17.
  
    0.752
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.