STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0656Prophage P1 protein 33, phage transcription regulator, ArpU family. (153 aa)    
Predicted Functional Partners:
lp_0642
Prophage P1 protein 19.
 
    0.737
lp_0681
Prophage P1 protein 58, lysin.
 
  
 0.724
lp_0661
Prophage P1 protein 38, terminase large subunit TerL.
 
  
 0.702
lp_0647
Prophage P1 protein 24, holliday junction resolvase.
 
    0.684
lp_2448
Prophage P2a protein 9, phage transcription regulator, Cro/CI family.
  
   
 0.673
lp_0643
Prophage P1 protein 20.
 
    0.643
lp_2440
Prophage P2a protein 17.
  
    0.617
lp_0630
Prophage P1 protein 7.
  
     0.610
lp_0662
Prophage P1 protein 39, portal protein.
 
    0.610
lp_0641
Prophage P1 protein 18, DNA single-strand annealing protein RecT.
 
    0.609
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.