STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0659Prophage P1 protein 36. (100 aa)    
Predicted Functional Partners:
lp_0660
Prophage P1 protein 37, terminase small subunit TerS.
  
    0.652
lp_0662
Prophage P1 protein 39, portal protein.
  
    0.652
lp_0661
Prophage P1 protein 38, terminase large subunit TerL.
  
    0.651
lp_0663
Prophage P1 protein 40, minor head protein.
  
    0.651
lp_0658
Prophage P1 protein 35.
  
    0.583
lp_0664
Prophage P1 protein 41, scaffold protein.
  
    0.452
lp_0665
Prophage P1 protein 42, major capsid protein.
  
    0.438
lp_0667
Prophage P1 protein 44.
  
    0.421
lp_0668
Prophage P1 protein 45, head-tail joining protein.
  
    0.419
lp_0669
Prophage P1 protein 46.
  
    0.419
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.