STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0708Acyl-[acyl-carrier protein] thioesterase. (261 aa)    
Predicted Functional Partners:
fabF
3-oxoacyl-[acyl-carrier protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
   
 
 0.909
fabI
Enoyl-[acyl-carrier protein] reductase (NADH).
   
 
 0.908
lp_0912
Enoyl-[acyl-carrier protein] reductase (NADH).
     
  0.900
lplA1
Lipoate-protein ligase.
     
  0.900
lplA2
Lipoate-protein ligase.
     
  0.900
rsmI
Methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
 
    0.888
holB
DNA-directed DNA polymerase III, delta' subunit.
 
    0.757
lp_0706
DNA replication intiation control protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
 
    0.757
glnQ2
Glutamine ABC transporter, ATP-binding protein.
  
  
 0.718
lp_0704
Hypothetical protein, DUF970 family.
  
    0.674
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.