STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0742Hypothetical membrane protein. (391 aa)    
Predicted Functional Partners:
rrp3
Two-component system response regulator,phosphate transport regulon.
  
  
 0.899
hpk3
Two-component system histidine kinase, sensor protein, phosphate transport regulon.
 
  
 0.862
minC
Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.
  
  
 0.838
lp_1886
Hypothetical protein.
  
    0.727
lp_0340
Hypothetical protein.
  
    0.699
lp_0613
Nuclease, NYN_YacP family.
  
    0.694
lp_1256
Extracellular protein.
  
    0.670
lp_1457
Aminoglycoside 3'-phosphotransferase.
  
    0.659
minD
Septum site-determining protein MinD.
  
    0.651
lp_2230
Hypothetical protein.
 
  
 0.637
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.