Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hpk3Two-component system histidine kinase, sensor protein, phosphate transport regulon. (467 aa)    
Predicted Functional Partners:
rrp3
Two-component system response regulator,phosphate transport regulon.
 0.997
rrp1
Two-component system response regulator.
 
 0.955
rrp7
Two-component system response regulator.
 
 0.855
lp_0742
Hypothetical membrane protein.
 
  
 0.848
rrp2
Two-component system response regulator.
 
 0.834
rrp11
Two component system response regulator.
 
 0.814
rrp5
Two-component system response regulator.
 
 0.805
phoU
Phosphate transport system regulatory protein; Plays a role in the regulation of phosphate uptake.
 
  
 0.675
pstC
Phosphate ABC transporter, permease protein.
  
  
 0.646
prfB-C
Peptide chain release factor 2, C-terminal fragment (natural frameshift); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.642
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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