Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
aadD-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. Belongs to the peptidase M15D family. (185 aa)    
Predicted Functional Partners:
lp_2212
NADH-flavin reductase.
   
    0.555
hflX
GTPase, HflX subfamily; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
  
    0.517
lp_0770
Multidrug transport protein, major facilitator superfamily (MFS).
       0.513
lp_3173
Cell surface protein, membrane-anchored.
  
    0.513
lp_0513
Hypothetical protein.
   
    0.506
lp_1163
Nucleotide-binding protein, universal stress protein UspA family.
   
    0.493
ddl
D-alanine-D-alanine ligase; Cell wall formation.
  
  
 0.493
lp_0701
Hypothetical protein, DUF2508 family.
  
    0.487
lp_1583
Hypothetical protein.
  
    0.478
lp_1584
Hypothetical protein.
  
    0.453
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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