STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0800Cell surface protein precursor, LPXTG-motif cell wall anchor. (2139 aa)    
Predicted Functional Partners:
tadA
Cytidine/deoxycytidylate deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
     
 0.840
lp_2889
Hypothetical protein, DUF3737 family.
  
    0.838
lp_0923
Cell surface protein precursor, LPXTG-motif cell wall anchor.
 
  
 0.781
lp_3064
Cell surface protein, CscC family.
  
    0.728
lp_3127
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
    0.722
lp_2975
Cell surface protein, CscC family.
  
    0.709
lp_2486
Mucus-binding protein, LPXTG-motif cell wall anchor.
  
    0.692
lp_2978
Cell surface protein, CscB family.
 
 
 0.685
lp_1256
Extracellular protein.
  
     0.608
lp_3006
Transcription regulator, TetR family.
  
    0.603
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (24%) [HD]