STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnQ1Glutamine ABC transporter, ATP-binding protein. (244 aa)    
Predicted Functional Partners:
lp_0802
Polar amino acid ABC transporter, substrate binding and permease protein.
 0.999
lp_3210
Cystine ABC transporter, permease protein.
 
 0.989
glnP2
Glutamine/histidine ABC transporter, permease protein.
 
 0.988
glnPH2
Glutamine ABC transporter, substrate binding and permease protein.
 
 0.979
glnP1
Glutamine ABC transporter, permease protein.
 
 0.958
glnM
Glutamine ABC transporter, permease protein.
 
 0.938
livC
Branched-chain amino acid ABC transporter,permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  
 0.910
lp_3225
ABC transporter, ATP-binding protein.
 
    
0.904
lp_2849
ABC transporter, ATP-binding protein.
 
 
   
0.902
lp_2894
ABC transporter, ATP-binding and permease protein.
 
 
   
0.900
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.