STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galM1Aldose 1-epimerase; Catalyzes the interconversion of alpha and beta anomers of maltose. (349 aa)    
Predicted Functional Partners:
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 0.988
galM3
Aldose 1-epimerase.
  
  
0.928
galM2
Aldose 1-epimerase.
  
 
 
0.925
lacA
Beta-galactosidase I.
  
 
 0.913
lacL
Beta-galactosidase, large subunit.
    
 0.909
lacM
Beta-galactosidase, small subunit.
    
 0.909
lp_1573
Bifunctional protein: transcription regulator; sugar kinase, ROK family.
  
 
 0.906
melA
Alpha-galactosidase.
    
  0.904
xylR
Xylose operon regulator, ROK family.
 
  
 0.610
choQ
Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein.
  
  
 0.509
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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