Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gph1Phosphohydrolase. (208 aa)    
Predicted Functional Partners:
mutT
Phosphohydrolase, MutT/nudix family.
 
    0.709
lp_1932
Phosphohydrolase.
  
    0.690
lp_2796
Cell surface protein precursor, LPXTG-motif cell wall anchor.
   
  
 0.678
lp_2921
Transport protein, major facilitator superfamily (MFS).
     
 0.665
tal3
Transaldolase.
  
  
 0.576
tal1
Transaldolase.
  
  
 0.572
lp_2792
Oxidoreductase.
  
  
 0.564
lp_2795
Cell surface protein precursor, LPXTG-motif cell wall anchor.
   
  
 0.562
tal2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
  
 0.554
uvrC
Excinuclease ABC, subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
  
  
 0.501
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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