STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglG1Transcription antiterminator, BlgB family. (280 aa)    
Predicted Functional Partners:
pts11BC
PTS system, beta-glucosides-specific EIIBC component.
 
 0.950
pts33BCA
PTS system beta-glucoside-specific EIIBCA component.
 
 0.878
pts30BCA
PTS system, beta-glucosides-specific EIIBCA component.
 
 0.872
pts11A
PTS system, EIIA component.
 
 0.855
lp_0887
PTS-related protein.
 
    0.853
pts24BCA
PTS system, beta-glucosides-specific EIIBCA component.
 
 0.795
pts27BCA
PTS system, beta-glucosides-specific EIIBCA component.
 
 0.781
pts12BCA
PTS system, beta-glucosides-specific EIIBCA component.
 
 0.774
pts5ABC
PTS system, trehalose-specific IIBC component.
 
 0.759
pts28ABC
PTS system, beta-glucosides-specific EIIABC component.
 
 0.754
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.