STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0922Carbohydrate (prephenate-like) transport protein, major facilitator superfamily (MFS). (432 aa)    
Predicted Functional Partners:
lp_1689
Drug resistance transport protein, major facilitator superfamily (MFS), EmrB/QacA subfamily.
  
    0.707
lp_3160
Multidrug transport protein, major facilitator superfamily (MFS).
  
  
 0.706
lp_0840
Multi drug transporter, major facilitator superfamily (MFS), EmrB/QacA subfamily.
  
     0.532
lp_1921
Drug resistance transport protein, major facilitator subfamily (MFS), EmrB/QacA subfamily.
  
     0.498
lp_1790
Phosphohydrolase, MutT/nudix family.
  
     0.494
lp_2836
Multidrug transport protein, major facilitator superfamily (MFS).
  
     0.478
lp_3303
Multidrug transport protein, major facilitator superfamily (MFS), EmrB/QacA subfamily.
  
     0.448
lp_0991
Multidrug transport protein, major facilitator superfamily (MFS).
  
     0.442
lp_0923
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
    0.438
lp_3142
Type 1 glutamine amidotransferase (GATase1)-like domain protein, ThiJ/PfpI family.
  
     0.432
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.