STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0925Acyltransferase. (615 aa)    
Predicted Functional Partners:
cps1E
Acyltransferase/acetyltransferase.
     
 0.845
lp_1916
Hypothetical membrane protein.
      
 0.840
lp_0924
Extracellular protein, MORN repeat family.
  
    0.827
crtN
Dehydrosqualene desaturase.
      
 0.707
lp_2960
Lipase/esterase, subfamily of SGNH-hydrolases.
    0.669
zmp2
Extracellular zinc metalloproteinase, M10 family.
  
    0.605
lp_0932
Extracellular lipoprotein precursor.
 
    0.589
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
     
 0.530
lp_0856
Acyltransferase.
  
  
0.515
lp_0923
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
     0.452
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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