Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lp_0926Hypothetical membrane protein. (84 aa)    
Predicted Functional Partners:
asp1
Alkaline shock protein.
 
  
 0.843
lp_0927
Hypothetical membrane protein.
  
    0.787
asp2
Alkaline shock protein.
 
  
 0.777
lp_0928
Hypothetical protein.
  
    0.740
lp_1708
Hypothetical protein; Belongs to the UPF0337 (CsbD) family.
 
  
 0.614
lp_2443
Prophage P2a protein 14.
  
  
 0.442
lp_0924
Extracellular protein, MORN repeat family.
       0.425
lp_0925
Acyltransferase.
       0.425
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.