STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hsdMType I restriction-modification system,methylation subunit. (528 aa)    
Predicted Functional Partners:
hsdR
Type I restriction-modification system,restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 0.999
hsdS1
Type I restriction-modification system,specificity subunit.
 
 0.997
hsdS2
Type I restriction-modification system,specificity subunit (fragment).
 
 
 0.949
hsdS3
Type I restriction-modification system,specificity subunit (fragment).
 
 
 0.949
lp_0941
Phage integrase; Belongs to the 'phage' integrase family.
 
  
 0.834
rrp3
Two-component system response regulator,phosphate transport regulon.
   
  
 0.726
mrr
Mrr restriction system protein.
 
  
 0.629
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.
  
  
 0.594
ktrB
Potassium uptake protein.
   
  
 0.591
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
      
 0.580
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.