STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0946Mucus-binding protein, LPXTG-motif cell wall anchor. (1189 aa)    
Predicted Functional Partners:
lp_0374
Extracellular protein, lysine-rich.
  
  
 0.851
sip2
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.838
sip3
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.838
ica1
Glycosyltransferase, family 2.
     
 0.718
sip1
Signal peptidase I; Belongs to the peptidase S26 family.
     
 0.713
lp_3676
Cell surface protein precursor, CscC family.
  
    0.631
lp_2796
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
  
 0.604
lp_3452
Cell surface protein, CscB family.
 
 
 0.592
lp_3450
Cell surface protein, CscC family.
 
   
 0.568
lp_2269
Hypothetical protein, DUF2507 family.
  
     0.545
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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