Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lp_0946Mucus-binding protein, LPXTG-motif cell wall anchor. (1189 aa)    
Predicted Functional Partners:
lp_3413
Cell surface protein precursor, CscA/DUF916 family.
  
  
 0.701
lp_2977
Cell surface protein precursor, CscA/DUF916 family.
  
  
 0.682
lp_2925
Cell surface protein precursor, LPXTG-motif cell wall anchor.
 
  
 0.667
lp_0800
Cell surface protein precursor, LPXTG-motif cell wall anchor.
  
  
 0.651
lp_1643
Mucus-binding protein precursor, LPXTG-motif cell wall anchor.
  
  
 0.648
lp_3676
Cell surface protein precursor, CscC family.
  
    0.644
lp_3114
Mucus-binding protein, LPXTG-motif cell wall anchor.
   
  
 0.634
lp_1446
Cell surface protein, CscB family.
   
  
 0.632
sip2
Signal peptidase I; Belongs to the peptidase S26 family.
      
 0.622
sip3
Signal peptidase I; Belongs to the peptidase S26 family.
      
 0.622
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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