STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0968Hypothetical membrane protein, YibE/F family. (416 aa)    
Predicted Functional Partners:
lp_0969
Hypothetical membrane protein, YibE/F family.
 
   
0.921
lp_0967
Hypothetical protein.
  
    0.784
lp_0970
Acetyltransferase, GNAT family.
  
    0.616
lp_0827
Hypothetical protein.
 
     0.601
lp_0910
DNA helicase.
  
    0.464
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
     0.456
lp_1283
Membrane sulfatase, alkaline phosphatase superfamily protein.
  
    0.439
lp_2169
Hypothetical protein.
  
     0.435
lp_2580
Sulfatase, alkaline phosphatase superfamily,membrane-bound.
 
    0.427
lp_2623
Hypothetical protein.
  
    0.421
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.