Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
xylP2Carbohydrate (isoprimoverose-like)/proton symporter, GPH family. (466 aa)    
Predicted Functional Partners:
lp_0973
Esterase (short chain).
  
    0.785
lp_1934
Transcription regulator, RpiR family.
  
  
 0.522
lp_0972
Bacteriocin immunity protein.
  
    0.509
lp_0442
Transcription regulator, RpiR family.
  
  
 0.495
lp_1157
Transcription regulator, RpiR family.
   
  
 0.466
lp_2578
Cell surface adherence protein,collagen-binding domain, LPXTG-motif cell wall anchor.
 
     0.465
lp_0125
Purine nucleoside phosphorylase.
   
  
 0.464
lp_2603
Transcription regulator, RpiR family.
   
  
 0.456
lp_3521
Transcription regulator, RpiR family.
   
  
 0.456
lp_3559
Transcription regulator, RpiR family.
   
  
 0.456
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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