Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lp_1000 | lp_1001 | lp_1000 | lp_1001 | Transcriptional attenuator, cell envelope-related, LytR family. | Phosphatase, PAP2 family. | 0.472 |
| lp_1001 | lp_1000 | lp_1001 | lp_1000 | Phosphatase, PAP2 family. | Transcriptional attenuator, cell envelope-related, LytR family. | 0.472 |
| lp_1001 | lp_1315 | lp_1001 | lp_1315 | Phosphatase, PAP2 family. | Membrane-associated phospholipid phosphatase. | 0.421 |
| lp_1001 | npsA | lp_1001 | lp_0578 | Phosphatase, PAP2 family. | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.517 |
| lp_1001 | pgsA | lp_1001 | lp_2303 | Phosphatase, PAP2 family. | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.646 |
| lp_1001 | rplF | lp_1001 | lp_1051 | Phosphatase, PAP2 family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.415 |
| lp_1001 | rpoZ | lp_1001 | lp_1613 | Phosphatase, PAP2 family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.513 |
| lp_1315 | lp_1001 | lp_1315 | lp_1001 | Membrane-associated phospholipid phosphatase. | Phosphatase, PAP2 family. | 0.421 |
| lp_1315 | npsA | lp_1315 | lp_0578 | Membrane-associated phospholipid phosphatase. | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.517 |
| lp_1315 | rplF | lp_1315 | lp_1051 | Membrane-associated phospholipid phosphatase. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.409 |
| lp_1315 | rpoZ | lp_1315 | lp_1613 | Membrane-associated phospholipid phosphatase. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.502 |
| npsA | lp_1001 | lp_0578 | lp_1001 | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | Phosphatase, PAP2 family. | 0.517 |
| npsA | lp_1315 | lp_0578 | lp_1315 | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | Membrane-associated phospholipid phosphatase. | 0.517 |
| npsA | rplF | lp_0578 | lp_1051 | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.844 |
| npsA | rpoZ | lp_0578 | lp_1613 | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.558 |
| pgsA | lp_1001 | lp_2303 | lp_1001 | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Phosphatase, PAP2 family. | 0.646 |
| rplF | lp_1001 | lp_1051 | lp_1001 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Phosphatase, PAP2 family. | 0.415 |
| rplF | lp_1315 | lp_1051 | lp_1315 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Membrane-associated phospholipid phosphatase. | 0.409 |
| rplF | npsA | lp_1051 | lp_0578 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.844 |
| rplF | rpoZ | lp_1051 | lp_1613 | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.919 |
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