Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cps4G | cps4I | lp_2102 | lp_2100 | Glycosyltransferase, family 1 (GT1). | Glycosyltransferase, family 2 (GT2). | 0.957 |
| cps4G | glnPH2 | lp_2102 | lp_2111 | Glycosyltransferase, family 1 (GT1). | Glutamine ABC transporter, substrate binding and permease protein. | 0.424 |
| cps4G | kup1 | lp_2102 | lp_0525 | Glycosyltransferase, family 1 (GT1). | Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.543 |
| cps4G | lysP | lp_2102 | lp_1008 | Glycosyltransferase, family 1 (GT1). | Lysine transport protein. | 0.507 |
| cps4G | pstB | lp_2102 | lp_0749 | Glycosyltransferase, family 1 (GT1). | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.493 |
| cps4I | cps4G | lp_2100 | lp_2102 | Glycosyltransferase, family 2 (GT2). | Glycosyltransferase, family 1 (GT1). | 0.957 |
| cps4I | glnPH2 | lp_2100 | lp_2111 | Glycosyltransferase, family 2 (GT2). | Glutamine ABC transporter, substrate binding and permease protein. | 0.459 |
| cps4I | kup1 | lp_2100 | lp_0525 | Glycosyltransferase, family 2 (GT2). | Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.556 |
| cps4I | lysP | lp_2100 | lp_1008 | Glycosyltransferase, family 2 (GT2). | Lysine transport protein. | 0.503 |
| cps4I | pstB | lp_2100 | lp_0749 | Glycosyltransferase, family 2 (GT2). | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.492 |
| glnPH2 | cps4G | lp_2111 | lp_2102 | Glutamine ABC transporter, substrate binding and permease protein. | Glycosyltransferase, family 1 (GT1). | 0.424 |
| glnPH2 | cps4I | lp_2111 | lp_2100 | Glutamine ABC transporter, substrate binding and permease protein. | Glycosyltransferase, family 2 (GT2). | 0.459 |
| glnPH2 | glpF4 | lp_2111 | lp_1175 | Glutamine ABC transporter, substrate binding and permease protein. | Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol, urea, H(2)O(2) and D/L-lactic acid. Is involved in the cellular racemization of lactate and lactate metabolism, but has likely a more general physiological role. The transported molecule is indeed lactic acid and not the lactate anion, in agreement with the assumption that, with very few exceptions, MIPs (major intrinsic proteins) only facilitate the transport of uncharged solutes. | 0.462 |
| glnPH2 | kup1 | lp_2111 | lp_0525 | Glutamine ABC transporter, substrate binding and permease protein. | Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.570 |
| glnPH2 | lysP | lp_2111 | lp_1008 | Glutamine ABC transporter, substrate binding and permease protein. | Lysine transport protein. | 0.570 |
| glnPH2 | pstB | lp_2111 | lp_0749 | Glutamine ABC transporter, substrate binding and permease protein. | Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. | 0.571 |
| glnPH2 | pyrE | lp_2111 | lp_2697 | Glutamine ABC transporter, substrate binding and permease protein. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.489 |
| glnPH2 | pyrP | lp_2111 | lp_2371 | Glutamine ABC transporter, substrate binding and permease protein. | Uracil transport protein. | 0.537 |
| glpF4 | glnPH2 | lp_1175 | lp_2111 | Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol, urea, H(2)O(2) and D/L-lactic acid. Is involved in the cellular racemization of lactate and lactate metabolism, but has likely a more general physiological role. The transported molecule is indeed lactic acid and not the lactate anion, in agreement with the assumption that, with very few exceptions, MIPs (major intrinsic proteins) only facilitate the transport of uncharged solutes. | Glutamine ABC transporter, substrate binding and permease protein. | 0.462 |
| glpF4 | kup1 | lp_1175 | lp_0525 | Glycerol uptake facilitator protein; Transporter that facilitates the transmembrane diffusion of water, dihydroxyacetone, glycerol, urea, H(2)O(2) and D/L-lactic acid. Is involved in the cellular racemization of lactate and lactate metabolism, but has likely a more general physiological role. The transported molecule is indeed lactic acid and not the lactate anion, in agreement with the assumption that, with very few exceptions, MIPs (major intrinsic proteins) only facilitate the transport of uncharged solutes. | Potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family. | 0.555 |
page 1 of 3