STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hepAHeptaprenyl diphosphate synthase component I. (189 aa)    
Predicted Functional Partners:
hepB1
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
 
 0.998
lp_1068
Extracellular protein, DUF1312 famliy.
 
    0.993
ndh2
NADH dehydrogenase, membrane-anchored.
    0.966
hepB2
Heptaprenyl diphosphate synthase component II; Belongs to the FPP/GGPP synthase family.
 
 
 0.960
lp_1602
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
 
 0.921
uppS
Undecaprenyl pyrophosphate synthetase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.
   
 
  0.902
lp_1070
Lipoprotein precursor, FMN-binding protein.
 
    0.856
apbE1
Thiamin biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.
 
  
 0.837
crtM
Dehydrosqualene synthase.
   
 
  0.804
lp_1546
1,4-dihydroxy-2-naphthoate octaprenyltransferase, UbiA family.
 
   
 0.775
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.