Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
citP | ldhL2 | lp_1102 | lp_1101 | Citrate transport protein. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.950 |
citP | mae | lp_1102 | lp_1105 | Citrate transport protein. | Malic enzyme, NAD-dependent. | 0.763 |
citP | pycA | lp_1102 | lp_2136 | Citrate transport protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.549 |
ldhD | ldhL2 | lp_2057 | lp_1101 | D-lactate dehydrogenase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.982 |
ldhD | mae | lp_2057 | lp_1105 | D-lactate dehydrogenase. | Malic enzyme, NAD-dependent. | 0.910 |
ldhD | pdhA | lp_2057 | lp_2154 | D-lactate dehydrogenase. | Pyruvate dehydrogenase complex, E1 component,alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.909 |
ldhD | pdhB | lp_2057 | lp_2153 | D-lactate dehydrogenase. | Pyruvate dehydrogenase complex, E1 component,beta subunit. | 0.910 |
ldhD | pflB | lp_2057 | lp_3313 | D-lactate dehydrogenase. | Formate C-acetyltransferase. | 0.914 |
ldhD | pflF | lp_2057 | lp_2598 | D-lactate dehydrogenase. | Formate C-acetyltransferase. | 0.914 |
ldhD | pycA | lp_2057 | lp_2136 | D-lactate dehydrogenase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.908 |
ldhD | pyk | lp_2057 | lp_1897 | D-lactate dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.984 |
ldhL2 | citP | lp_1101 | lp_1102 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Citrate transport protein. | 0.950 |
ldhL2 | ldhD | lp_1101 | lp_2057 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | D-lactate dehydrogenase. | 0.982 |
ldhL2 | mae | lp_1101 | lp_1105 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Malic enzyme, NAD-dependent. | 0.981 |
ldhL2 | mleS | lp_1101 | lp_1118 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Malolactic enzyme; Involved in the malolactic fermentation (MLF) of wine, which results in a natural decrease in acidity and favorable changes in wine flavors. Catalyzes the decarboxylation of L-malate to L-lactate. Belongs to the malic enzymes family. | 0.933 |
ldhL2 | pdhA | lp_1101 | lp_2154 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Pyruvate dehydrogenase complex, E1 component,alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.927 |
ldhL2 | pdhB | lp_1101 | lp_2153 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Pyruvate dehydrogenase complex, E1 component,beta subunit. | 0.933 |
ldhL2 | pflB | lp_1101 | lp_3313 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Formate C-acetyltransferase. | 0.924 |
ldhL2 | pflF | lp_1101 | lp_2598 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Formate C-acetyltransferase. | 0.923 |
ldhL2 | pycA | lp_1101 | lp_2136 | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.936 |
page 1 of 5