STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps2DUDP N-acetyl glucosamine 4-epimerase, NAD dependent. (315 aa)    
Predicted Functional Partners:
cps2C
Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase.
  
  
 0.977
glf2
UDP-galactopyranose mutase.
  
 
 0.969
glf1
UDP-galactopyranose mutase.
  
 
 0.963
cps2E
Priming glycosyltransferase, polyprenyl glycosylphosphotransferase.
 
  
 0.933
galU
UTP-glucose-1-phosphate uridylyltransferase.
 
 
 0.917
cps2F
Glycosyltransferase, family 1 (GT1).
 
  
 0.916
cps2I
Oligosaccharide transporter (flippase).
 
  
 0.904
galT
UTP-galactose-1-P uridylyltransferase.
     
 0.903
cps2H
Polysaccharide polymerase.
  
  
 0.880
cps2B
Polysaccharide biosynthesis protein,regulator.
  
  
 0.873
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.