STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps2FGlycosyltransferase, family 1 (GT1). (364 aa)    
Predicted Functional Partners:
cps2E
Priming glycosyltransferase, polyprenyl glycosylphosphotransferase.
  
 0.981
cps2G
Polysaccharide biosynthesis protein.
  
  
 0.960
cps2D
UDP N-acetyl glucosamine 4-epimerase, NAD dependent.
 
  
 0.916
cps2B
Polysaccharide biosynthesis protein,regulator.
  
  
 0.890
cps2A
Polysaccharide biosynthesis protein, chain length regulator.
  
  
 0.858
cps2I
Oligosaccharide transporter (flippase).
 
  
 0.829
cps4E
Polysaccharide biosynthesis polyprenyl glycosylphosphotransferase, priming glycosyltransferase.
  
 0.817
cps2C
Polysaccharide biosynthesis protein,phosphotyrosine-protein phosphatase.
  
  
 0.783
cps2H
Polysaccharide polymerase.
  
  
 0.714
cps1G
Glycosyltransferase, family 1 (GT1).
 
    0.659
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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