STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps2JGlycosyltransferase, family 1 (GT1). (341 aa)    
Predicted Functional Partners:
cps2K
Polysaccharide biosynthesis protein.
  
    0.908
cps2I
Oligosaccharide transporter (flippase).
 
  
 0.757
cps2D
UDP N-acetyl glucosamine 4-epimerase, NAD dependent.
 
  
 0.685
cps4J
Polysaccharide repeat unit transporter (flippase).
 
  
 0.683
cps2E
Priming glycosyltransferase, polyprenyl glycosylphosphotransferase.
 
  
 0.651
cps2B
Polysaccharide biosynthesis protein,regulator.
 
  
 0.620
cps2F
Glycosyltransferase, family 1 (GT1).
 
   
0.600
cps2H
Polysaccharide polymerase.
  
  
 0.580
pva1
Penicillin V acylase family protein.
   
  
 0.551
pva2
Penicillin V acylase family protein.
      
 0.548
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.