STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msaMannose-specific adhesin, LPXTG-motif cell wall anchor. (1010 aa)    
Predicted Functional Partners:
lp_1230
Transcription regulator, MarR family.
  
    0.930
lp_1228
Transcription regulator, AraC family.
  
  
 0.916
lp_0373
Cell surface protein precursor, LPXTG-motif cell wall anchor.
      
 0.707
lp_3060
Transcription regulator, AraC family.
  
  
 0.645
lp_3127
Mucus-binding protein, LPXTG-motif cell wall anchor.
      
 0.644
lp_0796
Carboxylesterase.
   
  
 0.642
lp_0973
Esterase (short chain).
 
   
 0.565
lp_2479
Prophage P2b protein 2, phage transcription regulator, Cro/CI family.
  
    0.553
lp_3415
Transcription regulator, AraC family.
      
 0.552
bsh1
Choloylglycine hydrolase; The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut; Belongs to the peptidase C59 family.
   
  
 0.552
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.