STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1281Hypothetical protein, DUF1797 family. (78 aa)    
Predicted Functional Partners:
gpd
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
   
    0.686
zapA
Cell-division Z-ring component, stimulator of FtsZ polymerization.
  
    0.664
lp_2135
Hypothetical protein, DUF2129 family.
  
    0.625
lp_0869
Extracellular protein, Ser/Thr-rich.
  
    0.605
lp_1457
Aminoglycoside 3'-phosphotransferase.
  
    0.566
lp_1283
Membrane sulfatase, alkaline phosphatase superfamily protein.
  
    0.558
lp_1388
Hypothetical protein.
  
    0.551
lp_1567
Hypothetical membrane protein.
  
    0.551
lp_0804
Hypothetical protein.
  
    0.533
araT1
Aromatic amino acid specific aminotransferase.
  
    0.515
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.