STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpCGlycerol-3-phosphate ABC transporter,ATP-binding protein; Belongs to the ABC transporter superfamily. (366 aa)    
Predicted Functional Partners:
ugpA
Glycerol-3-phosphate ABC transporter, permease protein.
 
 0.999
ugpE
Glycerol-3-phosphate ABC transporter, permease protein.
 0.999
ugpB
Glycerol-3-phosphate ABC transporter, substrate binding protein.
 0.999
mdxG
Maltodextrin ABC transporter, permease protein.
 
 
 0.948
mdxF
Maltodextrin ABC transporter, permease protein.
 
 
 0.890
lp_3643
ABC transporter, permease protein,mannose-related oligosaccharides.
 
 
 0.881
lp_3644
ABC transporter, permease protein,mannose-related oligosaccharides.
 
 
 0.848
mdxE
Maltodextrin ABC transporter, substrate binding protein.
  
 
 0.824
lp_3642
ABC transporter, substrate binding protein,mannose-related oligosaccharides.
  
 
 0.766
glpQ1
Glycerophosphodiester phosphodiesterase.
  
  
 0.731
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.