STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1415Hypothetical protein, DUF964 family; Belongs to the UPF0342 family. (114 aa)    
Predicted Functional Partners:
lp_1416
Phosphoesterase.
 
    0.821
lp_1417
Hypothetical membrane protein.
 
     0.802
lp_1418
Metal-dependent phosphohydrolase, HD family.
 
    0.780
lp_2061
Hypothetical protein.
  
    0.723
pbp2A
Transpeptidase-transglycosylase (penicillin binding protein 2A).
  
    0.719
lp_2273
Hypothetical protein, DUF1292 family; Belongs to the UPF0473 family.
 
    0.674
mecA
Negative regulator of competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
    0.671
lp_1146
Lipoprotein, pheromone precursor.
  
     0.625
lp_2261
Hypothetical protein, DUF948 family.
  
    0.614
ezrA
Septation ring formation regulator; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
    0.574
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.