STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_1459Extracellular protein, membrane-anchored. (107 aa)    
Predicted Functional Partners:
lp_2061
Hypothetical protein.
  
    0.773
lp_1577
Hypothetical extracellular protein.
   
    0.666
lp_1159
Extracellular protein, membrane-bound.
  
    0.664
lp_1460
tRNA binding domain protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.607
mecA
Negative regulator of competence; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis.
  
    0.606
lp_1866
Extracellular protein, DUF2140 family.
  
    0.579
lp_2230
Hypothetical protein.
   
    0.572
lp_2224
Dithiol-disulfide isomerase, DsbA family,FrnE-like subfamily.
  
    0.570
lp_2794
Flavodoxin.
  
    0.570
lp_2135
Hypothetical protein, DUF2129 family.
  
     0.567
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.