Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fecB | feoB | lp_1473 | lp_1466 | Iron chelatin ABC transporter, substrate binding protein. | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | 0.616 |
| fecB | sufB | lp_1473 | lp_1472 | Iron chelatin ABC transporter, substrate binding protein. | ABC transporter component, iron-sulfur cluster assembly protein SufB, iron regulated. | 0.842 |
| fecB | sufC | lp_1473 | lp_1468 | Iron chelatin ABC transporter, substrate binding protein. | ABC transporter, ATP-binding protein,iron-sulfur cluster assembly ATPase protein SufC. | 0.727 |
| fecB | sufD | lp_1473 | lp_1469 | Iron chelatin ABC transporter, substrate binding protein. | ABC transporter, iron-sulfur cluster assembly protein SufD. | 0.774 |
| fecB | sufS | lp_1473 | lp_1470 | Iron chelatin ABC transporter, substrate binding protein. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.779 |
| fecB | sufU | lp_1473 | lp_1471 | Iron chelatin ABC transporter, substrate binding protein. | SUF system FeS assembly protein, NifU family. | 0.778 |
| feoB | fecB | lp_1466 | lp_1473 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Iron chelatin ABC transporter, substrate binding protein. | 0.616 |
| feoB | sufB | lp_1466 | lp_1472 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | ABC transporter component, iron-sulfur cluster assembly protein SufB, iron regulated. | 0.552 |
| feoB | sufC | lp_1466 | lp_1468 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | ABC transporter, ATP-binding protein,iron-sulfur cluster assembly ATPase protein SufC. | 0.642 |
| feoB | sufD | lp_1466 | lp_1469 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | ABC transporter, iron-sulfur cluster assembly protein SufD. | 0.557 |
| feoB | sufS | lp_1466 | lp_1470 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.545 |
| feoB | sufU | lp_1466 | lp_1471 | Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family. | SUF system FeS assembly protein, NifU family. | 0.547 |
| lp_1088 | sufC | lp_1088 | lp_1468 | Hypothetical protein, DUF59 family. | ABC transporter, ATP-binding protein,iron-sulfur cluster assembly ATPase protein SufC. | 0.591 |
| lp_1088 | sufS | lp_1088 | lp_1470 | Hypothetical protein, DUF59 family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.418 |
| lp_1088 | sufU | lp_1088 | lp_1471 | Hypothetical protein, DUF59 family. | SUF system FeS assembly protein, NifU family. | 0.593 |
| lp_1482 | sufB | lp_1482 | lp_1472 | FeS assembly SUF system protein, DUF59 family. | ABC transporter component, iron-sulfur cluster assembly protein SufB, iron regulated. | 0.701 |
| lp_1482 | sufC | lp_1482 | lp_1468 | FeS assembly SUF system protein, DUF59 family. | ABC transporter, ATP-binding protein,iron-sulfur cluster assembly ATPase protein SufC. | 0.829 |
| lp_1482 | sufD | lp_1482 | lp_1469 | FeS assembly SUF system protein, DUF59 family. | ABC transporter, iron-sulfur cluster assembly protein SufD. | 0.767 |
| lp_1482 | sufS | lp_1482 | lp_1470 | FeS assembly SUF system protein, DUF59 family. | Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.465 |
| lp_1482 | sufU | lp_1482 | lp_1471 | FeS assembly SUF system protein, DUF59 family. | SUF system FeS assembly protein, NifU family. | 0.615 |
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